ade4 - Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences
Tools for multivariate data analysis. Several methods are provided for the analysis (i.e., ordination) of one-table (e.g., principal component analysis, correspondence analysis), two-table (e.g., coinertia analysis, redundancy analysis), three-table (e.g., RLQ analysis) and K-table (e.g., STATIS, multiple coinertia analysis). The philosophy of the package is described in Dray and Dufour (2007) <doi:10.18637/jss.v022.i04>.
Last updated 13 days ago
39 stars 9.28 score 6 dependencies 241 dependentsadespatial - Multivariate Multiscale Spatial Analysis
Tools for the multiscale spatial analysis of multivariate data. Several methods are based on the use of a spatial weighting matrix and its eigenvector decomposition (Moran's Eigenvectors Maps, MEM). Several approaches are described in the review Dray et al (2012) <doi:10.1890/11-1183.1>.
Last updated 13 days ago
34 stars 5.05 score 108 dependencies 1 dependentsadephylo - Exploratory Analyses for the Phylogenetic Comparative Method
Multivariate tools to analyze comparative data, i.e. a phylogeny and some traits measured for each taxa. The package contains functions to represent comparative data, compute phylogenetic proximities, perform multivariate analysis with phylogenetic constraints and test for the presence of phylogenetic autocorrelation. The package is described in Jombart et al (2010) <doi:10.1093/bioinformatics/btq292>.
Last updated 2 months ago
9 stars 4.93 score 88 dependencies 3 dependentsadegraphics - An S4 Lattice-Based Package for the Representation of Multivariate Data
Graphical functionalities for the representation of multivariate data. It is a complete re-implementation of the functions available in the 'ade4' package.
Last updated 2 months ago
9 stars 3.23 score 15 dependencies 5 dependentsade4TkGUI - 'ade4' Tcl/Tk Graphical User Interface
A Tcl/Tk GUI for some basic functions in the 'ade4' package.
Last updated 2 months ago
2 stars 2.87 score 16 dependencies